Publications

Featured on the cover of the September 2014 issue of JBC

Shomo ZD, Li F, Smith CN, Edmonds SR, Roston RL. 2024. "From Sensing to Acclimation: The Role of Membrane Lipid Remodeling in Plant Responses to Low Temperatures" Plant Physiology, kiae382, https://doi.org/10.1093/plphys/kiae382

Surber SM, Thien Thao NP, Smith CN, Shomo ZD, Barnes AC, & Roston RL. 2024. Exploring cotton SFR2’s conundrum in response to cold stress. Plant Signaling & Behavior, 19(1). https://doi.org/10.1080/15592324.2024.2362518

Kenchanmane Raju SK, Zhang Y, Mahboub S, Ngu DW, Qiu Y, Harmon FG, Schnable JC, Roston RL. 2024. Rhythmic lipid and gene expression responses to chilling in panicoid grasses, Journal of Experimental Botany, erae247, https://doi.org/10.1093/jxb/erae247

Li-Beisson Y and Roston RL, 2024. Plant and Algal Lipids: In All Their States and On All Scales, Plant and Cell Physiology, pcae061, https://doi.org/10.1093/pcp/pcae061

Shomo ZD, Mahboub S, Vanviratikul H, McCormick M, Tulyananda T, Roston RL, Warakanont J. 2024. All Members of the Arabidopsis DGAT and PDAT Acyltransferase Families Operate During High and Low Temperatures. Plant Physiol. doi: 10.1093/plphys/kiae074.

Kim P, Mahboob S, Nguyen HT, Eastman S, Fiala O, Sousek M, Gaussoin RE, Brungardt JL, Jackson-Ziems TA, Roston R, Alfano JR, Clemente TE, Guo M. 2024. Characterization of Soybean Events with Enhanced Expression of the Microtubule-Associated Protein 65-1 (MAP65-1). Mol Plant Microbe Interact. Jan;37(1):62-71. doi: 10.1094/MPMI-09-23-0134-R.

Barnes AC, Myers JL, Surber SM, Liang Z, Mower JP, Schnable JC, Roston RL. 2023. Oligogalactolipid production during cold challenge is conserved in early diverging lineages. Journal of Experimental Botany. 26:erad241. doi: 10.1093/jxb/erad241.

Harrold A, Cruikshank A, Penas B, Roston RL. 2023. Introducing High School Biology Students to Biochemistry with a Short, Content-Oriented Module. Biochemistry and Molecular Biology Education. https://doi.org/10.1002/bmb.21782

Rodrigues de Queiroz A*, Hines C*, Brown J*, Sahay S*, Vijayan J, Stone JM, Bickford N, Wuellner M, Glowacka K, Buan NR, Roston RL. (2023) The Effects of Exogenously Applied Antioxidants on Plant Growth and Resilience. Phytochemistry Reviews. doi: 10.1007/s11101-023-09862-3 *Equal author contributions

Gao H, McCormick A, Roston RL, Lu Y. (2023) “Editorial: Structure and Function of Chloroplasts (Volume III)” Frontiers in Plant Science. 14 doi:10.3389/fpls.2023.1145680

Booth CS, Crowther A, Helikar R, Luong T, Howell ME, Couch BA, Roston RL, van Dijk K, Helikar T. (2021) Teaching advanced concepts in regulation of the lac operon with modeling and simulation. CourseSource. doi: 10.24918/cs.2021.39

Booth CS, Song C, Howell ME, Rasquinha A, Saska A, Helikar R, Sikich SM, Couch BA, Dijk Kv, Roston RL, Helikar T (2021) Teaching Metabolism in Upper-Division Undergraduate Biochemistry Courses using Online Computational Systems and Dynamical Models Improves Student Performance. CBE—Life Sciences Education 20: ar13

Meng X, Liang Z, Dai X, Zhang Y, Mahboub S, Ngu DW, Roston RL, Schnable JC (2021) Predicting transcriptional responses to cold stress across plant species. Proceedings of the National Academy of Sciences 118: e2026330118 doi: 10.1073/pnas.2026330118

Wang P, Chai YN, Roston R, Dayan FE, Schachtman DP. (2021) The Sorghum bicolor Root Exudate Sorgoleone Shapes Bacterial Communities and Delays Network Formation. mSystems. 6(2):e00749-20. doi: 10.1128/mSystems.00749-20.

Mahboub S, Shomo ZD, Regester RM, Albusharif M, Roston RL (2021) Three Methods to Extract Membrane Glycerolipids: Comparing Sensitivity to Lipase Degradation and Yield. Methods Molecular Biology 2295: 15-27 doi: 10.1007/978-1-0716-1362-7_2

Lu Y, Liu L, Roston RL, Soll J, Gao H. (2020) Editorial: Structure and Function of Chloroplasts - Volume II. Frontiers in Plant Science. doi: 10.3389/fpls.2020.620152

Jakubowski HV, Bock N, Busta L, Pearce M, Roston RL, Shomo ZD, Terrell CR. (2020) Introducing Climate Change into the Biochemistry and Molecular Biology Curriculum. Biochemistry and Molecular Biology Education. 49(2):167-188. doi: 10.1002/bmb.21422

Howell ME, Booth CS, Sikich SM, Helikar T, van Dijk K, Roston RL, Couch BA (2020) Interactive learning modules with 3D printed models improve student understanding of protein structure–function relationships. Biochemistry and Molecular Biology Education.48:356-358. doi: 10.1002/bmb.21362

Barnes AC, Elowsky CG, Roston RL (2019) An Arabidopsis protoplast isolation method reduces cytosolic acidification and activation of the chloroplast stress sensor SENSITIVE TO FREEZING 2. Plant signaling & behavior. 14:9, DOI: 10.1080/15592324.2019.1629270

Howell ME, Booth CS, Sikich SM, Helikar T, Roston RL, Couch BA, van Dijk K (2019) Student Understanding of DNA Structure–Function Relationships Improves from Using 3D Learning Modules with Dynamic 3D Printed Models. Biochemistry and Molecular Biology Education. 47 (3):303-317.

Yan L, Kenchanmane Raju SK, Lai X, Zhang Y, Dai X, Rodriguez O, Mahboub S, Roston RL, and Schnable JC (2019) Parallels between natural selection in the cold‐adapted crop‐wild relative Tripsacum dactyloides and artificial selection in temperate adapted maize. Plant Journal. doi:10.1111/tpj.14376.

Roston RL, Jouhet J, Yu F, Gao H (2018) Editorial: Structure and Function of Chloroplasts. Frontiers in Plant Science. 9 (1656) doi: 10.3389/fpls.2018.01656

Howell ME, van Dijk K, Booth CS, Helikar T, Couch BA, Roston RL. (2018). Visualizing the Invisible: A Guide to Designing, Printing, and Incorporating Dynamic 3D Molecular Models to Teach Structure-Function Relationships. Journal of microbiology & biology education, 19, 19.3.100. doi:10.1128/jmbe.v19i3.1663

Kenchanmane Raju SK, Barnes AC, Schnable JC, Roston RL (2018) Low-temperature tolerance in land plants: Are transcript and membrane responses conserved? Plant Science. 276, 73-86. https://doi.org/10.1016/j.plantsci.2018.08.002

LaBrant E, Barnes AC, Roston RL (2018) Lipid transport required to make photosynthetic membranes. Photosynthesis Res. 138, 345-360. doi: 10.1007/s11120-018-0545-5

Tsai C-H, Uygun S, Roston R, Shiu S-H, Benning C (2018) Recovery from N Deprivation Is a Transcriptionally and Functionally Distinct State in Chlamydomonas. Plant Physiol. 176, 2007-2023 doi: 10.1104/pp.17.01546

Zhang Y, Ngu DW, Carvalho D, Liang Z, Qiu Y, Roston RL, Schnable JC (2017) Differentially Regulated Orthologs in Sorghum and the Subgenomes of Maize. The Plant Cell. 29, 1938-1951. doi: 10.1105/tpc.17.00354

Rocha AG, Baldwin AJ, Roston RL, Capron R, O'Riley E, Yamaguchi T, Midorikawa T and Inoue K. (2016) Polyglycine-dependent protein targeting to the chloroplast envelope. PLoS One. 11, e0167802.

Kelly AA, Kalisch B, Hölzl G, Schultze S, Thiele J, Melzer M, Roston RL, Benning C, Dörmann P. (2016) Synthesis and transfer of galactolipids in the chloroplast envelope membranes of Arabidopsis thaliana. Proceedings of the National Academy of Sciences, USA. 113, 10714-10719.

Barnes AC, Benning C, and Roston RL. (2016) Chloroplast membrane remodeling during freezing stress is accompanied by cytoplasmic acidification activating SENSITIVE TO FREEZING 2. Plant Physiology. 171, 2140-2149.

Warakanont J, Tsai C-H, Michel EJS, Murphy III G, Hsueh PY, Roston RL, Sears BB, Benning C. (2015) Chloroplast lipid transfer processes in Chlamydomonas reinhardtii involving a TRIGALACTOSYLDIACYLGLYCEROL 2 (TGD2) orthologue. The Plant Journal. 84, 1005-1020.

Tsai C-H, Zienkiewicz K, Amstutz C, Brink B, Warakanont J, Roston RL, Christoph B. (2015) Dynamics of protein and polar lipid recruitment during lipid droplet assembly in Chlamydomonas reinhardtii. The Plant Journal. 83, 650-660

Vu HS, Roston RL, Shiva S, Wurtele ES, Wang X, Shah J, Welti R. (2015) Modifications of membrane lipids in response to wounding of Arabidopsis thaliana leaves. Plant Signaling and Behavior. 10, e1056422. DOI:10.1080/15592324.2015.1056422

Fan J, Yan C, Roston RL, Shanklin J, and Xu C. (2014) Arabidopsis lipins, PDAT1 acyltransferase and SDP1 triacylglycerol lipase synergistically direct fatty acids toward ß-oxidation thereby maintaining membrane lipid homeostasis. Plant Cell. 26, 4119-4134. doi:10.1105/tpc.114.130377

Roston RL, Wang K, Kuhn L, Benning C. (2014). Structural determinants allowing transferase activity in SENSITIVE TO FREEZING 2, classified as a family I glycosyl hydrolase. Journal of Biological Chemistry, 289, 26089-26106.

Hurlock AK, Roston RL, Wang K, Benning C. (2014). Lipid Trafficking in Plant Cells. Traffic, 15, 915-932. doi: 10.1111/tra.12187.

Roston RL, Hurlock AK, Benning C. (2014). Plastidic ABC proteins. In Plant ABC Transporters. ed. Geisler M. Springer International Publishing. 22, 103-136.

Muthan B, Roston RL, Froehlich J, Benning C. (2013) Probing Arabidopsis chloroplast diacylglycerol pools by selectively targeting bacterial diacylglycerol kinase to suborganellar membranes. Plant Physiology, 163, 61-74.

Vieler A, Wu G, Tsai C-H, Bullard B, Cornish AJ, Harvey C, Reca I-B, Thornburg C, Achawanantakun R, Buehl CJ, Campbell MS, Cavalier D, Childs KL, Clark TJ, Deshpande R, Erickson E, Ferguson AA, Handee W, Kong Q, Li X, Liu B, Lundback S, Peng C, Roston RL, Sanjaya, Simpson JP, TerBush A, Warakanont J, Zäuner S, Farre EM, Hegg EL, Jiang N, Kuo M-H, Lu Y, Niyogi KK, Ohlrogge J, Osteryoung KW, Shachar-Hill Y, Sears BB, Sun Y, Takahashi H, Yandell M, Shiu S-H, Benning C. (2012) Genome, functional gene annotation, and nuclear transformation of the heterokont oleaginous alga Nannochloropsis oceanica CCMP1779. PLoS Genetics 8(11): e1003064. doi:10.1371/journal.pgen.1003064

Roston RL, Gao J, Murcha MW, Whelan J, Benning C. (2012) TGD1, -2, and -3 proteins involved in lipid trafficking form ATP-binding cassette (ABC) transporter with multiple substrate-binding proteins. Journal of Biological Chemistry 287, 21406-21415.

Hsu S-C, Endow JK, Ruppel NJ, Roston RL, Baldwin AJ, Inoue K. (2011) Functional diversification of thylakoidal processing peptidases in Arabidopsis thaliana. PLoS ONE 6, e27258. doi:10.1371/journal.pone.0027258

Roston RL, Gao J, Xu C, Benning C. (2011) Arabidopsis chloroplast lipid transport protein TGD2 disrupts membranes and is part of a large complex. The Plant Journal. 66, 759-769.

Shipman-Roston RL, Ruppel NJ, Damoc C, Phinney BS, Inoue K. (2010) The significance of protein maturation by plastidic type I signal peptidase 1 for thylakoid development in Arabidopsis thaliana chloroplasts. Plant Physiology 152, 1297-1308.

Shipman RL, Inoue K. (2009) Suborganellar localization of plastidic type I signal peptidase 1 depends on chloroplast development. FEBS letters 583, 938-942.

Hess JF, Budamagunta MS, Shipman RL, FitzGerald PG, Voss JC. (2006) Characterization of the linker 2 region in human vimentin using site-directed spin labeling and electron paramagnetic resonance. Biochemistry 45, 11737-11743.

Inoue K, Potter D, Shipman RL, Perea JV, Theg SM (2005) Involvement of a type I signal peptidase in biogenesis of chloroplasts – Towards identification of the enzyme for maturation of the chloroplast protein translocation channel. In Photosynthesis: Fundamental Aspects to Global Perspectives, eds. van der Est A and Bruce D. (Allen Press, Lawrence, KS), pp.933-935

Inoue K, Baldwin AJ, Shipman RL, Matsui K, Theg SM, Ohme-Takagi M. (2005) Complete maturation of the plastid protein translocation channel requires a type I signal peptidase. The Journal of Cell Biology 171, 425-430.